BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013A05SP1|AL426448
(821 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1622 0.0
3x_Contig66 536 e-152
>3x_Contig1530
Length = 6216
Score = 1622 bits (817), Expect = 0.0
Identities = 819/821 (99%)
Strand = Plus / Minus
Query: 1 atccttagagccaatccttatcccgaagttacggatctattttgccgacttcccttatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3986 atccttagagccaatccttatcccgaagttacggatctattttgccgacttcccttatct 3927
Query: 61 acattattctatcaactagaggctgttcaccttggagacctgctgcggttatcagtacga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3926 acattattctatcaactagaggctgttcaccttggagacctgctgcggttatcagtacga 3867
Query: 121 cctggcatgaaaactattccttcctgtggattttcaagggccgtcgcgggcgcaccggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3866 cctggcatgaaaactattccttcctgtggattttcaagggccgtcgcgggcgcaccggac 3807
Query: 181 ccagcacaagggctgggctcttccagccataagaccccctctccggataaaccaattccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3806 ccagcacaagggctgggctcttccagccataagaccccctctccggataaaccaattccg 3747
Query: 241 gggtgataagctgttaagaagaaaagataactcctcccagggctcgcgccgacgtctcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3746 gggtgataagctgttaagaagaaaagataactcctcccagggctcgcgccgacgtctcca 3687
Query: 301 cattcagttacgttaccgtgaagaatccatatccaggttccggaatattaaccggattcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3686 cattcagttacgttaccgtgaagaatccatatccaggttccggaatattaaccggattcc 3627
Query: 361 ctttcgatggtggcctagaaaattaggcctttgaaacggagcttccccatctcttaggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3626 ctttcgatggtggcctagaaaattaggcctttgaaacggagcttccccatctcttaggat 3567
Query: 421 cgactaacccacgtccaactgctgttgacgtggaacctttccccacttcagtcttcaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3566 cgactaacccacgtccaactgctgttgacgtggaacctttccccacttcagtcttcaaag 3507
Query: 481 ttctcatttgaatatttgctactaccaccaagatctgcactagaggccgttctacccagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3506 ttctcatttgaatatttgctactaccaccaagatctgcactagaggccgttctacccagc 3447
Query: 541 tttacagcctaggcttcgtcactgacctccacgcctgcctactcgtcagggcatcatatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3446 tttacagcctaggcttcgtcactgacctccacgcctgcctactcgtcagggcatcatatt 3387
Query: 601 aaccctgacggtggagtataggtaacacgcttgagcgccatccattttcagggctagttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3386 aaccctgacggtggagtataggtaacacgcttgagcgccatccattttcagggctagttc 3327
Query: 661 attcggccggtgagttgttacacactccttagcggattccgacttccatggccaccgtcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3326 attcggccggtgagttgttacacactccttagcggattccgacttccatggccaccgtcc 3267
Query: 721 ggctgtctaratgaactaacaccttttgtggtgtctgatgagcgtgtattccggcacctt 780
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3266 ggctgtctagatgaactaacaccttttgtggtgtctgatgagcgtgtattccggcacctt 3207
Query: 781 aactccacgttcggttcatcccgcatcgccarttctgctta 821
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3206 aactccacgttcggttcatcccgcatcgccagttctgctta 3166
>3x_Contig66
Length = 1023
Score = 536 bits (270), Expect = e-152
Identities = 270/270 (100%)
Strand = Plus / Plus
Query: 1 atccttagagccaatccttatcccgaagttacggatctattttgccgacttcccttatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atccttagagccaatccttatcccgaagttacggatctattttgccgacttcccttatct 271
Query: 61 acattattctatcaactagaggctgttcaccttggagacctgctgcggttatcagtacga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 acattattctatcaactagaggctgttcaccttggagacctgctgcggttatcagtacga 331
Query: 121 cctggcatgaaaactattccttcctgtggattttcaagggccgtcgcgggcgcaccggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 cctggcatgaaaactattccttcctgtggattttcaagggccgtcgcgggcgcaccggac 391
Query: 181 ccagcacaagggctgggctcttccagccataagaccccctctccggataaaccaattccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ccagcacaagggctgggctcttccagccataagaccccctctccggataaaccaattccg 451
Query: 241 gggtgataagctgttaagaagaaaagataa 270
||||||||||||||||||||||||||||||
Sbjct: 452 gggtgataagctgttaagaagaaaagataa 481
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3299
Number of Sequences: 1807
Number of extensions: 3299
Number of successful extensions: 21
Number of sequences better than 1.0e-20: 2
length of query: 821
length of database: 10,358,551
effective HSP length: 16
effective length of query: 805
effective length of database: 10,329,639
effective search space: 8315359395
effective search space used: 8315359395
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)